wot
A software package for analyzing snapshots of developmental processes
파일 탐색기
최종 버전 다운로드 (.zip)- build.sh
- Dockerfile
- build.sh
- Dockerfile
- examples.json
- tools.json
- analytics.html
- head.html
- header.html
- navbar.html
- base.html
- documentation.html
- home.html
- style.scss
- Intro_fig.png
- Nbk1_fig.png
- Nbk2_fig.png
- Nbk3_fig.png
- Nbk4_fig.png
- Nbk5_fig.png
- Nbk6_fig.png
- Nbk7_fig.png
- _config.yml
- citing_wot.html
- cli_documentation.html
- file_formats.md
- Gemfile
- index.md
- source_code.html
- tutorial.html
- command_line_example.sh
- Notebook-0-wot-setup.ipynb
- Notebook-1-FLE-cell_sets-gene_sets.ipynb
- Notebook-2-compute-transport-maps.ipynb
- Notebook-3-long-range-couplings.ipynb
- Notebook-4-ancestors-descendants-trajectories.ipynb
- Notebook-5-fate-matrices.ipynb
- Notebook-6-transition_table.ipynb
- Notebook-7-ot-validation.ipynb
- Notebook-8-predictive-TFs.ipynb
- conf.py
- index.rst
- requirements.txt
- wot.commands.rst
- wot.graphics.rst
- wot.grn.rst
- wot.io.rst
- wot.ot.rst
- wot.rst
- wot.simulate.rst
- barcodes.tsv
- genes.tsv
- matrix.mtx
- msigdb.v6.1.symbols.gmt
- test.grp
- test_gene_sets.gmx
- test_gene_sets2.gmt
- test_gene_sets2.gmx
- gene_sets.gmx
- matrix.txt
- t0_t1.csv
- t1_t2.csv
- t2_t3.csv
- t3_t4.csv
- day_pairs.txt
- test_gene_set_scores.py
- test_io.py
- test_transport.py
- optimal_transport.wdl
- optimal_transport_validation_parameter_sweep.wdl
- __init__.py
- cells_by_gene_set.py
- census.py
- convert_matrix.py
- diff_exp.py
- fates.py
- gene_set_scores.py
- optimal_transport.py
- optimal_transport_validation.py
- trajectory.py
- trajectory_divergence.py
- trajectory_trends.py
- transition_table.py
- util.py
- __init__.py
- color.py
- plot.py
- __init__.py
- io.py
- performance.py
- __init__.py
- initializer.py
- optimal_transport.py
- optimal_transport_validation.py
- ot_model.py
- util.py
- __init__.py
- simulate.py
- __init__.py
- chaining.py
- diff_exp.py
- trajectory_divergence.py
- transport_map_model.py
- util.py
- __init__.py
- __main__.py
- dataset_util.py
- gene_set_scores.py
- population.py
- .gitattributes
- .gitignore
- environment.yml
- LICENSE
- MANIFEST.in
- README.md
- release_notes.md
- setup.cfg
- setup.py
// repository documentation
Was this content helpful?
(0 ratings)