MONAI
AI Toolkit for Healthcare Imaging
파일 탐색기
최종 버전 다운로드 (.zip)- bug_report.md
- feature_request.md
- question.md
- blossom-ci.yml
- build_docs.yml
- chatops.yml
- cicd_tests.yml
- codeql-analysis.yml
- conda.yml
- cron-ngc-bundle.yml
- cron.yml
- docker.yml
- integration.yml
- pythonapp-gpu.yml
- pythonapp-hyena-gpu.yml
- release.yml
- setupapp.yml
- weekly-preview.yml
- codecov.yml
- CODEOWNERS
- dco.yml
- dependabot.yml
- pull_request_template.md
- custom.css
- 3d_paired.png
- affine.png
- amp_training_a100.png
- amp_training_v100.png
- arch_modules.png
- auto3dseg.png
- blend.png
- blend_images.png
- brats_distributed.png
- BTCV_organs.png
- cache_dataset.png
- cam.png
- coplenet.png
- dataset_progress.png
- datasets_speed.png
- decollate_batch.png
- deepedit.png
- deepgrow.png
- deepgrow_scheme.png
- detection.png
- dints-overview.png
- exp_mgmt.png
- fast_training.png
- favicon.ico
- federated.svg
- gmm_feature_set_comparison_s.png
- hovernet_diagram.png
- invert_transforms.png
- lazy_resampling_apply_pending_example.svg
- lazy_resampling_homogeneous_matrices.svg
- lazy_resampling_lazy_example_1.svg
- lazy_resampling_none_example.svg
- lazy_resampling_trad_example_1.svg
- lr_finder.png
- maisi_infer.png
- maisi_train.png
- matshow3d.png
- medical_transforms.png
- metrics_report.png
- mil-patches.jpg
- models_ensemble.png
- MONAI-logo-color.png
- MONAI_arch.png
- MONAI_bundle_cloud.png
- MONAI_clouds.png
- MONAI_map_cloud.png
- mri_recon.png
- nsight_comparison.png
- nuclick.png
- pathology-meta.png
- pathology.png
- postprocessing_transforms.png
- precision_options.png
- python.svg
- sliding_window.png
- ssl_overview.png
- swin_unetr.png
- threaddataloader.png
- transfer_mmar.png
- tta.png
- unet-pipe.png
- UNETR.png
- vista2d.png
- vista3d.png
- workflows.png
- modules.rst
- monai.rst
- api.rst
- applications.md
- apps.rst
- auto3dseg.rst
- bundle.rst
- bundle_intro.rst
- conf.py
- config_syntax.md
- contrib.rst
- data.rst
- engines.rst
- fl.rst
- handlers.rst
- highlights.rst
- index.rst
- inferers.rst
- installation.md
- lazy_resampling.rst
- losses.rst
- mb_properties.rst
- mb_specification.rst
- metrics.rst
- modules.md
- MONAI-logo-color.png
- networks.rst
- optimizers.rst
- precision_accelerating.md
- transforms.rst
- transforms_idx.rst
- utils.rst
- visualize.rst
- whatsnew.rst
- whatsnew_0_5.md
- whatsnew_0_6.md
- whatsnew_0_7.md
- whatsnew_0_8.md
- whatsnew_0_9.md
- whatsnew_1_0.md
- whatsnew_1_1.md
- whatsnew_1_2.md
- whatsnew_1_3.md
- whatsnew_1_4.md
- whatsnew_1_5.md
- whatsnew_1_5_1.md
- whatsnew_1_5_2.md
- whatsnew_1_6.md
- .readthedocs.yaml
- Makefile
- requirements.txt
- gmm.cpp
- gmm.h
- gmm_cpu.cpp
- gmm_cuda.cu
- gmm_cuda_linalg.cuh
- __init__.py
- loader.py
- __init__.py
- __main__.py
- auto_runner.py
- bundle_gen.py
- data_analyzer.py
- ensemble_builder.py
- hpo_gen.py
- transforms.py
- utils.py
- __init__.py
- interaction.py
- transforms.py
- __init__.py
- dataset.py
- interaction.py
- transforms.py
- __init__.py
- coco.py
- matching.py
- __init__.py
- retinanet_detector.py
- retinanet_network.py
- __init__.py
- array.py
- box_ops.py
- dictionary.py
- __init__.py
- anchor_utils.py
- ATSS_matcher.py
- box_coder.py
- box_selector.py
- detector_utils.py
- hard_negative_sampler.py
- predict_utils.py
- __init__.py
- __init__.py
- autoencoderkl_maisi.py
- controlnet_maisi.py
- diffusion_model_unet_maisi.py
- __init__.py
- __init__.py
- __init__.py
- mmars.py
- model_desc.py
- __init__.py
- __main__.py
- nnunet_bundle.py
- nnunetv2_runner.py
- utils.py
- __init__.py
- transforms.py
- __init__.py
- utils.py
- __init__.py
- utils.py
- __init__.py
- inferer.py
- __init__.py
- hovernet_loss.py
- __init__.py
- lesion_froc.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- __init__.py
- utils.py
- __init__.py
- varnetblock.py
- __init__.py
- coil_sensitivity_model.py
- complex_unet.py
- utils.py
- varnet.py
- __init__.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- complex_utils.py
- fastmri_reader.py
- mri_utils.py
- __init__.py
- label_desc.py
- utils.py
- __init__.py
- inferer.py
- sampler.py
- transforms.py
- __init__.py
- datasets.py
- utils.py
- __init__.py
- algo_gen.py
- analyzer.py
- operations.py
- seg_summarizer.py
- utils.py
- __init__.py
- __main__.py
- config_item.py
- config_parser.py
- properties.py
- reference_resolver.py
- scripts.py
- utils.py
- workflows.py
- __init__.py
- deviceconfig.py
- print_dependencies.py
- type_definitions.py
- bilateral.cpp
- bilateral.h
- bilateralfilter_cpu.cpp
- bilateralfilter_cpu_phl.cpp
- bilateralfilter_cuda.cu
- bilateralfilter_cuda_phl.cu
- hash_table.cuh
- permutohedral.cpp
- permutohedral.h
- permutohedral_cpu.cpp
- permutohedral_cuda.cu
- bf_layer_cpu_backward.cpp
- bf_layer_cpu_forward.cpp
- bf_layer_gpu_backward.cu
- bf_layer_gpu_forward.cu
- trainable_bilateral.cpp
- trainable_bilateral.h
- jbf_layer_cpu_backward.cpp
- jbf_layer_cpu_forward.cpp
- jbf_layer_gpu_backward.cu
- jbf_layer_gpu_forward.cu
- trainable_joint_bilateral.cpp
- trainable_joint_bilateral.h
- filtering.h
- lltm.h
- lltm_cpu.cpp
- lltm_cuda.cu
- bounds_common.h
- interpolation_common.h
- pushpull.h
- pushpull_cpu.cpp
- pushpull_cuda.cu
- common_utils.h
- meta_macros.h
- resample_utils.h
- tensor_description.h
- tensor_indexing.h
- ext.cpp
- __init__.py
- box_utils.py
- csv_saver.py
- dataloader.py
- dataset.py
- dataset_summary.py
- decathlon_datalist.py
- fft_utils.py
- folder_layout.py
- grid_dataset.py
- image_dataset.py
- image_reader.py
- image_writer.py
- iterable_dataset.py
- itk_torch_bridge.py
- meta_obj.py
- meta_tensor.py
- samplers.py
- synthetic.py
- test_time_augmentation.py
- thread_buffer.py
- torchscript_utils.py
- ultrasound_confidence_map.py
- utils.py
- video_dataset.py
- wsi_datasets.py
- wsi_reader.py
- __init__.py
- evaluator.py
- trainer.py
- utils.py
- workflow.py
- __init__.py
- client_algo.py
- monai_algo.py
- __init__.py
- constants.py
- exchange_object.py
- filters.py
- __init__.py
- __init__.py
- average_precision.py
- calibration.py
- checkpoint_loader.py
- checkpoint_saver.py
- classification_saver.py
- clearml_handlers.py
- confusion_matrix.py
- decollate_batch.py
- earlystop_handler.py
- garbage_collector.py
- hausdorff_distance.py
- ignite_metric.py
- logfile_handler.py
- lr_schedule_handler.py
- mean_dice.py
- mean_iou.py
- metric_logger.py
- metrics_reloaded_handler.py
- metrics_saver.py
- mlflow_handler.py
- nvtx_handlers.py
- panoptic_quality.py
- parameter_scheduler.py
- postprocessing.py
- probability_maps.py
- regression_metrics.py
- roc_auc.py
- smartcache_handler.py
- stats_handler.py
- surface_distance.py
- tensorboard_handlers.py
- trt_handler.py
- utils.py
- validation_handler.py
- __init__.py
- inferer.py
- merger.py
- splitter.py
- utils.py
- __init__.py
- adversarial_loss.py
- aucm_loss.py
- barlow_twins.py
- boundary_loss.py
- cldice.py
- contrastive.py
- deform.py
- dice.py
- ds_loss.py
- focal_loss.py
- giou_loss.py
- hausdorff_loss.py
- image_dissimilarity.py
- mcc_loss.py
- multi_scale.py
- nacl_loss.py
- perceptual.py
- spatial_mask.py
- spectral_loss.py
- ssim_loss.py
- sure_loss.py
- tversky.py
- unified_focal_loss.py
- utils.py
- __init__.py
- absolute_volume_difference.py
- active_learning_metrics.py
- average_precision.py
- calibration.py
- confusion_matrix.py
- cumulative_average.py
- embedding_collapse.py
- f_beta_score.py
- fid.py
- froc.py
- generalized_dice.py
- hausdorff_distance.py
- loss_metric.py
- meandice.py
- meaniou.py
- metric.py
- mmd.py
- panoptic_quality.py
- regression.py
- rocauc.py
- surface_dice.py
- surface_distance.py
- utils.py
- wrapper.py
- __init__.py
- acti_norm.py
- activation.py
- activation_checkpointing.py
- aspp.py
- attention_utils.py
- backbone_fpn_utils.py
- cablock.py
- convolutions.py
- crf.py
- crossattention.py
- denseblock.py
- dints_block.py
- downsample.py
- dynunet_block.py
- encoder.py
- fcn.py
- feature_pyramid_network.py
- fft_utils_t.py
- hyena.py
- localnet_block.py
- mednext_block.py
- mlp.py
- patchembedding.py
- pos_embed_utils.py
- regunet_block.py
- rel_pos_embedding.py
- segresnet_block.py
- selfattention.py
- spade_norm.py
- spatialattention.py
- squeeze_and_excitation.py
- text_embedding.py
- transformerblock.py
- unetr_block.py
- upsample.py
- warp.py
- __init__.py
- conjugate_gradient.py
- convutils.py
- drop_path.py
- factories.py
- filtering.py
- gmm.py
- simplelayers.py
- spatial_transforms.py
- utils.py
- vector_quantizer.py
- weight_init.py
- __init__.py
- ahnet.py
- attentionunet.py
- autoencoder.py
- autoencoderkl.py
- basic_unet.py
- basic_unetplusplus.py
- cell_sam_wrapper.py
- classifier.py
- controlnet.py
- daf3d.py
- densenet.py
- diffusion_model_unet.py
- dints.py
- dynunet.py
- efficientnet.py
- flexible_unet.py
- fullyconnectednet.py
- generator.py
- highresnet.py
- hovernet.py
- hyena_nd_unetr.py
- masked_autoencoder_vit.py
- mednext.py
- milmodel.py
- navit.py
- netadapter.py
- patchgan_discriminator.py
- quicknat.py
- regressor.py
- regunet.py
- resnet.py
- restormer.py
- segresnet.py
- segresnet_ds.py
- senet.py
- spade_autoencoderkl.py
- spade_diffusion_model_unet.py
- spade_network.py
- swin_unetr.py
- torchvision_fc.py
- transchex.py
- transformer.py
- unet.py
- unetr.py
- varautoencoder.py
- vista3d.py
- vit.py
- vitautoenc.py
- vnet.py
- voxelmorph.py
- vqvae.py
- __init__.py
- ddim.py
- ddpm.py
- pndm.py
- rectified_flow.py
- scheduler.py
- __init__.py
- trt_compiler.py
- utils.py
- __init__.py
- lr_finder.py
- lr_scheduler.py
- novograd.py
- utils.py
- __init__.py
- array.py
- batch.py
- dictionary.py
- functional.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- array.py
- dictionary.py
- functional.py
- utils.py
- __init__.py
- dictionary.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- array.py
- dictionary.py
- functional.py
- __init__.py
- array.py
- dictionary.py
- __init__.py
- adaptors.py
- compose.py
- inverse.py
- inverse_batch_transform.py
- nvtx.py
- traits.py
- transform.py
- utils.py
- utils_create_transform_ims.py
- utils_morphological_ops.py
- utils_pytorch_numpy_unification.py
- __init__.py
- component_store.py
- decorators.py
- deprecate_utils.py
- dist.py
- enums.py
- jupyter_utils.py
- misc.py
- module.py
- nvtx.py
- ordering.py
- profiling.py
- safeeval.py
- state_cacher.py
- tf32.py
- type_conversion.py
- __init__.py
- class_activation_maps.py
- gradient_based.py
- img2tensorboard.py
- occlusion_sensitivity.py
- utils.py
- visualizer.py
- __init__.py
- _version.py
- py.typed
- README.md
- torch.patch
- __init__.py
- test_deepedit_transforms.py
- __init__.py
- test_deepgrow_interaction.py
- test_deepgrow_transforms.py
- __init__.py
- test_deepgrow_dataset.py
- __init__.py
- test_detection_coco_metrics.py
- __init__.py
- test_retinanet.py
- test_retinanet_detector.py
- __init__.py
- test_anchor_box.py
- test_atss_box_matcher.py
- test_box_coder.py
- test_detector_boxselector.py
- test_detector_utils.py
- test_hardnegsampler.py
- __init__.py
- test_box_transform.py
- __init__.py
- test_autoencoderkl_maisi.py
- test_controlnet_maisi.py
- test_diffusion_model_unet_maisi.py
- __init__.py
- test_nnunetv2_runner_command.py
- __init__.py
- test_nuclick_transforms.py
- __init__.py
- test_from_engine_hovernet.py
- __init__.py
- test_generate_distance_map.py
- test_generate_distance_mapd.py
- test_generate_instance_border.py
- test_generate_instance_borderd.py
- test_generate_instance_centroid.py
- test_generate_instance_centroidd.py
- test_generate_instance_contour.py
- test_generate_instance_contourd.py
- test_generate_instance_type.py
- test_generate_instance_typed.py
- test_generate_succinct_contour.py
- test_generate_succinct_contourd.py
- test_generate_watershed_markers.py
- test_generate_watershed_markersd.py
- test_generate_watershed_mask.py
- test_generate_watershed_maskd.py
- test_hovernet_instance_map_post_processing.py
- test_hovernet_instance_map_post_processingd.py
- test_hovernet_nuclear_type_post_processing.py
- test_watershed.py
- test_watershedd.py
- __init__.py
- test_pathology_he_stain.py
- test_pathology_he_stain_dict.py
- __init__.py
- test_lesion_froc.py
- test_pathology_prob_nms.py
- test_prepare_batch_hovernet.py
- test_sliding_window_hovernet_inference.py
- __init__.py
- test_recon_net_utils.py
- __init__.py
- test_extract_data_key_from_meta_keyd.py
- test_kspace_mask.py
- test_reference_based_normalize_intensity.py
- test_reference_based_spatial_cropd.py
- __init__.py
- test_complex_utils.py
- test_fastmri_reader.py
- test_mri_utils.py
- __init__.py
- test_point_based_window_inferer.py
- test_vista3d_sampler.py
- test_vista3d_transforms.py
- __init__.py
- test_auto3dseg.py
- test_auto3dseg_bundlegen.py
- test_check_hash.py
- test_cross_validation.py
- test_decathlondataset.py
- test_download_and_extract.py
- test_download_url_yandex.py
- test_mednistdataset.py
- test_mmar_download.py
- test_tciadataset.py
- __init__.py
- test_json_serialization.py
- __init__.py
- test_bundle_ckpt_export.py
- test_bundle_download.py
- test_bundle_get_data.py
- test_bundle_push_to_hf_hub.py
- test_bundle_trt_export.py
- test_bundle_utils.py
- test_bundle_verify_metadata.py
- test_bundle_verify_net.py
- test_bundle_workflow.py
- test_component_locator.py
- test_config_item.py
- test_config_parser.py
- test_reference_resolver.py
- __init__.py
- test_cv2_dist.py
- test_print_dependencies.py
- test_print_info.py
- test_meta_tensor.py
- test_spatial_ndim.py
- test_to_from_meta_tensord.py
- test_compute_shape_offset.py
- test_decollate.py
- test_dev_collate.py
- test_file_basename.py
- test_ori_ras_lps.py
- test_zoom_affine.py
- test_arraydataset.py
- test_box_utils.py
- test_cachedataset.py
- test_cachedataset_parallel.py
- test_cachedataset_persistent_workers.py
- test_cachentransdataset.py
- test_check_missing_files.py
- test_create_cross_validation_datalist.py
- test_csv_dataset.py
- test_csv_iterable_dataset.py
- test_csv_saver.py
- test_dataloader.py
- test_dataset.py
- test_dataset_func.py
- test_dataset_summary.py
- test_fft_utils.py
- test_folder_layout.py
- test_gdsdataset.py
- test_grid_dataset.py
- test_handler_smartcache.py
- test_hashing.py
- test_header_correct.py
- test_image_dataset.py
- test_image_rw.py
- test_init_reader.py
- test_is_supported_format.py
- test_iterable_dataset.py
- test_itk_torch_bridge.py
- test_itk_writer.py
- test_list_data_collate.py
- test_lmdbdataset.py
- test_lmdbdataset_dist.py
- test_load_decathlon_datalist.py
- test_make_nifti.py
- test_mapping_file.py
- test_masked_patch_wsi_dataset.py
- test_nifti_header_revise.py
- test_nifti_rw.py
- test_npzdictitemdataset.py
- test_nrrd_reader.py
- test_numpy_reader.py
- test_partition_dataset.py
- test_partition_dataset_classes.py
- test_patch_dataset.py
- test_patch_wsi_dataset.py
- test_persistentdataset.py
- test_persistentdataset_dist.py
- test_pil_reader.py
- test_png_rw.py
- test_pydicom_reader.py
- test_resample_datalist.py
- test_sampler_dist.py
- test_select_cross_validation_folds.py
- test_shuffle_buffer.py
- test_sliding_patch_wsi_dataset.py
- test_smartcachedataset.py
- test_synthetic.py
- test_thread_buffer.py
- test_threadcontainer.py
- test_video_datasets.py
- test_weighted_random_sampler_dist.py
- test_zipdataset.py
- __init__.py
- test_ensemble_evaluator.py
- test_gradient_accumulation.py
- test_prepare_batch_default.py
- test_prepare_batch_default_dist.py
- test_prepare_batch_diffusion.py
- test_prepare_batch_extra_input.py
- __init__.py
- test_fl_monai_algo.py
- test_fl_monai_algo_dist.py
- __init__.py
- test_fl_exchange_object.py
- __init__.py
- test_fl_monai_algo_stats.py
- __init__.py
- test_handler_average_precision.py
- test_handler_calibration_error.py
- test_handler_checkpoint_loader.py
- test_handler_checkpoint_saver.py
- test_handler_classification_saver.py
- test_handler_classification_saver_dist.py
- test_handler_clearml_image.py
- test_handler_clearml_stats.py
- test_handler_confusion_matrix.py
- test_handler_confusion_matrix_dist.py
- test_handler_decollate_batch.py
- test_handler_early_stop.py
- test_handler_garbage_collector.py
- test_handler_hausdorff_distance.py
- test_handler_ignite_metric.py
- test_handler_lr_scheduler.py
- test_handler_mean_dice.py
- test_handler_mean_iou.py
- test_handler_metrics_reloaded.py
- test_handler_metrics_saver.py
- test_handler_metrics_saver_dist.py
- test_handler_mlflow.py
- test_handler_nvtx.py
- test_handler_panoptic_quality.py
- test_handler_parameter_scheduler.py
- test_handler_post_processing.py
- test_handler_prob_map_producer.py
- test_handler_regression_metrics.py
- test_handler_regression_metrics_dist.py
- test_handler_rocauc.py
- test_handler_rocauc_dist.py
- test_handler_stats.py
- test_handler_surface_distance.py
- test_handler_tb_image.py
- test_handler_tb_stats.py
- test_handler_validation.py
- test_trt_compile.py
- test_write_metrics_reports.py
- __init__.py
- test_avg_merger.py
- test_controlnet_inferers.py
- test_diffusion_inferer.py
- test_latent_diffusion_inferer.py
- test_patch_inferer.py
- test_saliency_inferer.py
- test_slice_inferer.py
- test_sliding_window_inference.py
- test_sliding_window_splitter.py
- test_wsi_sliding_window_splitter.py
- test_zarr_avg_merger.py
- __init__.py
- test_auto3dseg_ensemble.py
- test_auto3dseg_hpo.py
- test_deepedit_interaction.py
- test_hovernet_nuclear_type_post_processingd.py
- test_integration_autorunner.py
- test_integration_bundle_run.py
- test_integration_classification_2d.py
- test_integration_determinism.py
- test_integration_fast_train.py
- test_integration_gpu_customization.py
- test_integration_lazy_samples.py
- test_integration_nnunet_bundle.py
- test_integration_nnunetv2_runner.py
- test_integration_segmentation_3d.py
- test_integration_sliding_window.py
- test_integration_stn.py
- test_integration_unet_2d.py
- test_integration_workers.py
- test_integration_workflows.py
- test_integration_workflows_adversarial.py
- test_integration_workflows_gan.py
- test_loader_semaphore.py
- test_mapping_filed.py
- test_meta_affine.py
- test_metatensor_integration.py
- test_module_list.py
- test_one_of.py
- test_pad_collation.py
- test_reg_loss_integration.py
- test_retinanet_predict_utils.py
- test_seg_loss_integration.py
- test_spatial_combine_transforms.py
- test_testtimeaugmentation.py
- test_vis_gradbased.py
- test_vista3d_utils.py
- __init__.py
- test_bending_energy.py
- test_diffusion_loss.py
- __init__.py
- test_global_mutual_information_loss.py
- test_local_normalized_cross_correlation_loss.py
- __init__.py
- test_adversarial_loss.py
- test_aucm_loss.py
- test_barlow_twins_loss.py
- test_boundary_loss.py
- test_cldice_loss.py
- test_contrastive_loss.py
- test_dice_ce_loss.py
- test_dice_focal_loss.py
- test_dice_loss.py
- test_ds_loss.py
- test_focal_loss.py
- test_generalized_dice_focal_loss.py
- test_generalized_dice_loss.py
- test_generalized_wasserstein_dice_loss.py
- test_giou_loss.py
- test_hausdorff_loss.py
- test_masked_dice_loss.py
- test_masked_loss.py
- test_mcc_loss.py
- test_multi_scale.py
- test_nacl_loss.py
- test_perceptual_loss.py
- test_spectral_loss.py
- test_ssim_loss.py
- test_sure_loss.py
- test_tversky_loss.py
- test_unified_focal_loss.py
- __init__.py
- test_absolute_volume_difference.py
- test_calibration_metric.py
- test_compute_average_precision.py
- test_compute_confusion_matrix.py
- test_compute_f_beta.py
- test_compute_fid_metric.py
- test_compute_froc.py
- test_compute_generalized_dice.py
- test_compute_meandice.py
- test_compute_meaniou.py
- test_compute_mmd_metric.py
- test_compute_multiscalessim_metric.py
- test_compute_panoptic_quality.py
- test_compute_regression_metrics.py
- test_compute_roc_auc.py
- test_compute_variance.py
- test_cumulative.py
- test_cumulative_average.py
- test_cumulative_average_dist.py
- test_embedding_collapse.py
- test_hausdorff_distance.py
- test_label_quality_score.py
- test_loss_metric.py
- test_metrics_reloaded.py
- test_ssim_metric.py
- test_surface_dice.py
- test_surface_distance.py
- __init__.py
- test_acn_block.py
- test_factorized_increase.py
- test_factorized_reduce.py
- test_p3d_block.py
- __init__.py
- test_dvf2ddf.py
- test_warp.py
- __init__.py
- test_adn.py
- test_CABlock.py
- test_convolutions.py
- test_crf_cpu.py
- test_crf_cuda.py
- test_crossattention.py
- test_denseblock.py
- test_downsample_block.py
- test_dynunet_block.py
- test_fpn_block.py
- test_hyena_block.py
- test_localnet_block.py
- test_mlp.py
- test_patchembedding.py
- test_regunet_block.py
- test_se_block.py
- test_se_blocks.py
- test_segresnet_block.py
- test_selfattention.py
- test_simple_aspp.py
- test_spatialattention.py
- test_subpixel_upsample.py
- test_text_encoding.py
- test_transformerblock.py
- test_unetr_block.py
- test_upsample_block.py
- __init__.py
- test_bilateral_approx_cpu.py
- test_bilateral_approx_cuda.py
- test_bilateral_precise.py
- test_phl_cpu.py
- test_phl_cuda.py
- test_trainable_bilateral.py
- test_trainable_joint_bilateral.py
- __init__.py
- test_affine_transform.py
- test_apply_filter.py
- test_channel_pad.py
- test_conjugate_gradient.py
- test_drop_path.py
- test_gaussian.py
- test_gaussian_filter.py
- test_get_layers.py
- test_gmm.py
- test_grid_pull.py
- test_hilbert_transform.py
- test_lltm.py
- test_median_filter.py
- test_polyval.py
- test_preset_filters.py
- test_savitzky_golay_filter.py
- test_separable_filter.py
- test_skip_connection.py
- test_vector_quantizer.py
- test_weight_init.py
- __init__.py
- test_dints_cell.py
- test_dints_mixop.py
- __init__.py
- test_localnet.py
- test_regunet.py
- __init__.py
- test_ahnet.py
- test_attentionunet.py
- test_autoencoder.py
- test_autoencoderkl.py
- test_basic_unet.py
- test_basic_unetplusplus.py
- test_bundle_init_bundle.py
- test_cell_sam_wrapper.py
- test_checkpointunet.py
- test_controlnet.py
- test_daf3d.py
- test_densenet.py
- test_diffusion_model_unet.py
- test_dints_network.py
- test_discriminator.py
- test_dynunet.py
- test_efficientnet.py
- test_flexible_unet.py
- test_fullyconnectednet.py
- test_generator.py
- test_globalnet.py
- test_highresnet.py
- test_hovernet.py
- test_hyena_nd_unetr.py
- test_masked_autoencoder_vit.py
- test_mednext.py
- test_milmodel.py
- test_navit.py
- test_net_adapter.py
- test_network_consistency.py
- test_patch_gan_dicriminator.py
- test_quicknat.py
- test_resnet.py
- test_restormer.py
- test_segresnet.py
- test_segresnet_ds.py
- test_senet.py
- test_spade_autoencoderkl.py
- test_spade_diffusion_model_unet.py
- test_spade_vaegan.py
- test_swin_unetr.py
- test_torchvision_fc_model.py
- test_transchex.py
- test_transformer.py
- test_unet.py
- test_unetr.py
- test_varautoencoder.py
- test_vista3d.py
- test_vit.py
- test_vitautoenc.py
- test_vnet.py
- test_voxelmorph.py
- test_vqvae.py
- test_vqvaetransformer_inferer.py
- __init__.py
- test_scheduler_ddim.py
- test_scheduler_ddpm.py
- test_scheduler_pndm.py
- test_scheduler_rflow.py
- __init__.py
- test_copy_model_state.py
- test_eval_mode.py
- test_freeze_layers.py
- test_pixelunshuffle.py
- test_replace_module.py
- test_train_mode.py
- __init__.py
- test_bundle_onnx_export.py
- test_convert_to_onnx.py
- test_convert_to_torchscript.py
- test_convert_to_trt.py
- test_lazy_onnx_import.py
- test_save_state.py
- test_to_onehot.py
- test_varnet.py
- __init__.py
- test_generate_param_groups.py
- test_lr_finder.py
- test_lr_scheduler.py
- test_optim_novograd.py
- __init__.py
- cprofile_profiling.py
- min_classes.py
- profiling.py
- pyspy_profiling.py
- README.md
- 7106
- 7136
- 7166
- 7196
- femur_input.png
- femur_result.npy
- neck_input.png
- neck_result.npy
- 1D_BP_bwd.txt
- 1D_BP_fwd.txt
- anatomical.nii
- anatomical_label.nii.gz
- bundle_test_network.py
- config_fl_evaluate.json
- config_fl_filters.json
- config_fl_stats_1.json
- config_fl_stats_2.json
- config_fl_train.json
- cpp_resample_answers.py
- data_config.json
- fl_infer_properties.json
- image0.jpeg
- image1.jpeg
- inference.json
- inference.yaml
- integration_answers.py
- kitty_test.jpg
- logging.conf
- matshow3d_patch_test.png
- matshow3d_rgb_test.png
- matshow3d_test.png
- metadata.json
- multi_gpu_evaluate.json
- multi_gpu_train.json
- python_workflow_properties.json
- reoriented_anat_moved.nii
- reoriented_anat_moved_label.nii.gz
- responsive_inference.json
- signal.npy
- threadcontainer_plot_test.png
- transform_metatensor_cases.yaml
- __init__.py
- test_compose.py
- test_some_of.py
- __init__.py
- test_pad_nd_dtypes.py
- test_rand_weighted_crop.py
- test_rand_weighted_cropd.py
- __init__.py
- test_apply.py
- test_resample.py
- __init__.py
- test_compute_ho_ver_maps.py
- test_compute_ho_ver_maps_d.py
- test_foreground_mask.py
- test_foreground_maskd.py
- test_rand_histogram_shiftd.py
- test_scale_intensity_range_percentiles.py
- test_scale_intensity_range_percentilesd.py
- __init__.py
- test_inverse.py
- test_inverse_array.py
- test_inverse_dict.py
- test_invert.py
- test_invertd.py
- test_traceable_transform.py
- __init__.py
- test_label_filterd.py
- test_probnms.py
- test_probnmsd.py
- test_remove_small_objects.py
- __init__.py
- test_convert_box_points.py
- test_grid_patch.py
- test_grid_patchd.py
- test_rand_grid_patch.py
- test_rand_grid_patchd.py
- test_spatial_resampled.py
- __init__.py
- test_randomizable.py
- test_randomizable_transform_type.py
- __init__.py
- test_apply_transform_to_points.py
- test_apply_transform_to_pointsd.py
- test_identity.py
- test_identityd.py
- test_lambda.py
- test_lambdad.py
- test_rand_lambda.py
- test_rand_lambdad.py
- test_simulatedelay.py
- test_simulatedelayd.py
- test_splitdim.py
- test_splitdimd.py
- test_transform_points_image_to_worldd.py
- test_transform_points_world_to_imaged.py
- __init__.py
- test_correct_crop_centers.py
- test_get_unique_labels.py
- test_print_transform_backends.py
- test_soft_clip.py
- __init__.py
- test_activations.py
- test_activationsd.py
- test_adaptors.py
- test_add_coordinate_channels.py
- test_add_coordinate_channelsd.py
- test_add_extreme_points_channel.py
- test_add_extreme_points_channeld.py
- test_adjust_contrast.py
- test_adjust_contrastd.py
- test_affine.py
- test_affine_grid.py
- test_affined.py
- test_as_channel_last.py
- test_as_channel_lastd.py
- test_as_discrete.py
- test_as_discreted.py
- test_border_pad.py
- test_border_padd.py
- test_bounding_rect.py
- test_bounding_rectd.py
- test_cast_to_type.py
- test_cast_to_typed.py
- test_center_scale_crop.py
- test_center_scale_cropd.py
- test_center_spatial_crop.py
- test_center_spatial_cropd.py
- test_classes_to_indices.py
- test_classes_to_indicesd.py
- test_clip_intensity_percentiles.py
- test_clip_intensity_percentilesd.py
- test_compose_get_number_conversions.py
- test_concat_itemsd.py
- test_convert_to_multi_channel.py
- test_convert_to_multi_channeld.py
- test_copy_itemsd.py
- test_create_grid_and_affine.py
- test_create_rotate_order.py
- test_crop_foreground.py
- test_crop_foregroundd.py
- test_cucim_dict_transform.py
- test_cucim_transform.py
- test_data_stats.py
- test_data_statsd.py
- test_delete_itemsd.py
- test_detect_envelope.py
- test_distance_transform_edt.py
- test_divisible_pad.py
- test_divisible_padd.py
- test_ensure_channel_first.py
- test_ensure_channel_firstd.py
- test_ensure_type.py
- test_ensure_typed.py
- test_fg_bg_to_indices.py
- test_fg_bg_to_indicesd.py
- test_fill_holes.py
- test_fill_holesd.py
- test_flatten_sub_keysd.py
- test_flip.py
- test_flipd.py
- test_fourier.py
- test_gaussian_sharpen.py
- test_gaussian_sharpend.py
- test_gaussian_smooth.py
- test_gaussian_smoothd.py
- test_generate_heatmap.py
- test_generate_heatmapd.py
- test_generate_label_classes_crop_centers.py
- test_generate_pos_neg_label_crop_centers.py
- test_generate_spatial_bounding_box.py
- test_get_extreme_points.py
- test_gibbs_noise.py
- test_gibbs_noised.py
- test_grid_distortion.py
- test_grid_distortiond.py
- test_grid_split.py
- test_grid_splitd.py
- test_histogram_normalize.py
- test_histogram_normalized.py
- test_image_filter.py
- test_intensity_stats.py
- test_intensity_statsd.py
- test_inverse_collation.py
- test_k_space_spike_noise.py
- test_k_space_spike_noised.py
- test_keep_largest_connected_component.py
- test_keep_largest_connected_componentd.py
- test_label_filter.py
- test_label_to_contour.py
- test_label_to_contourd.py
- test_label_to_mask.py
- test_label_to_maskd.py
- test_load_image.py
- test_load_imaged.py
- test_load_spacing_orientation.py
- test_map_and_generate_sampling_centers.py
- test_map_binary_to_indices.py
- test_map_classes_to_indices.py
- test_map_label_value.py
- test_map_label_valued.py
- test_map_transform.py
- test_mask_intensity.py
- test_mask_intensityd.py
- test_mean_ensemble.py
- test_mean_ensembled.py
- test_median_smooth.py
- test_median_smoothd.py
- test_morphological_ops.py
- test_nifti_endianness.py
- test_normalize_intensity.py
- test_normalize_intensityd.py
- test_nvtx_decorator.py
- test_nvtx_transform.py
- test_orientation.py
- test_orientationd.py
- test_rand_adjust_contrast.py
- test_rand_adjust_contrastd.py
- test_rand_affine.py
- test_rand_affine_grid.py
- test_rand_affined.py
- test_rand_axis_flip.py
- test_rand_axis_flipd.py
- test_rand_bias_field.py
- test_rand_bias_fieldd.py
- test_rand_coarse_dropout.py
- test_rand_coarse_dropoutd.py
- test_rand_coarse_shuffle.py
- test_rand_coarse_shuffled.py
- test_rand_crop_by_label_classes.py
- test_rand_crop_by_label_classesd.py
- test_rand_crop_by_pos_neg_label.py
- test_rand_crop_by_pos_neg_labeld.py
- test_rand_cucim_dict_transform.py
- test_rand_cucim_transform.py
- test_rand_deform_grid.py
- test_rand_elastic_2d.py
- test_rand_elastic_3d.py
- test_rand_elasticd_2d.py
- test_rand_elasticd_3d.py
- test_rand_flip.py
- test_rand_flipd.py
- test_rand_gaussian_noise.py
- test_rand_gaussian_noised.py
- test_rand_gaussian_sharpen.py
- test_rand_gaussian_sharpend.py
- test_rand_gaussian_smooth.py
- test_rand_gaussian_smoothd.py
- test_rand_gibbs_noise.py
- test_rand_gibbs_noised.py
- test_rand_grid_distortion.py
- test_rand_grid_distortiond.py
- test_rand_histogram_shift.py
- test_rand_k_space_spike_noise.py
- test_rand_k_space_spike_noised.py
- test_rand_rician_noise.py
- test_rand_rician_noised.py
- test_rand_rotate.py
- test_rand_rotate90.py
- test_rand_rotate90d.py
- test_rand_rotated.py
- test_rand_scale_crop.py
- test_rand_scale_cropd.py
- test_rand_scale_intensity.py
- test_rand_scale_intensity_fixed_mean.py
- test_rand_scale_intensity_fixed_meand.py
- test_rand_scale_intensityd.py
- test_rand_shift_intensity.py
- test_rand_shift_intensityd.py
- test_rand_simulate_low_resolution.py
- test_rand_simulate_low_resolutiond.py
- test_rand_spatial_crop.py
- test_rand_spatial_crop_samples.py
- test_rand_spatial_crop_samplesd.py
- test_rand_spatial_cropd.py
- test_rand_std_shift_intensity.py
- test_rand_std_shift_intensityd.py
- test_rand_torchio.py
- test_rand_torchiod.py
- test_rand_zoom.py
- test_rand_zoomd.py
- test_randidentity.py
- test_random_order.py
- test_randtorchvisiond.py
- test_regularization.py
- test_remove_repeated_channel.py
- test_remove_repeated_channeld.py
- test_repeat_channel.py
- test_repeat_channeld.py
- test_resample_backends.py
- test_resample_to_match.py
- test_resample_to_matchd.py
- test_resampler.py
- test_resize.py
- test_resize_with_pad_or_crop.py
- test_resize_with_pad_or_cropd.py
- test_resized.py
- test_rotate.py
- test_rotate90.py
- test_rotate90d.py
- test_rotated.py
- test_save_classificationd.py
- test_save_image.py
- test_save_imaged.py
- test_savitzky_golay_smooth.py
- test_savitzky_golay_smoothd.py
- test_scale_intensity.py
- test_scale_intensity_fixed_mean.py
- test_scale_intensity_range.py
- test_scale_intensity_ranged.py
- test_scale_intensityd.py
- test_select_itemsd.py
- test_shift_intensity.py
- test_shift_intensityd.py
- test_signal_continuouswavelet.py
- test_signal_fillempty.py
- test_signal_fillemptyd.py
- test_signal_rand_add_gaussiannoise.py
- test_signal_rand_add_sine.py
- test_signal_rand_add_sine_partial.py
- test_signal_rand_add_squarepulse.py
- test_signal_rand_add_squarepulse_partial.py
- test_signal_rand_drop.py
- test_signal_rand_scale.py
- test_signal_rand_shift.py
- test_signal_remove_frequency.py
- test_smooth_field.py
- test_sobel_gradient.py
- test_sobel_gradientd.py
- test_spacing.py
- test_spacingd.py
- test_spatial_crop.py
- test_spatial_cropd.py
- test_spatial_gpu_support.py
- test_spatial_pad.py
- test_spatial_padd.py
- test_spatial_resample.py
- test_squeezedim.py
- test_squeezedimd.py
- test_std_shift_intensity.py
- test_std_shift_intensityd.py
- test_threshold_intensity.py
- test_threshold_intensityd.py
- test_to_contiguous.py
- test_to_cupy.py
- test_to_cupyd.py
- test_to_device.py
- test_to_deviced.py
- test_to_numpy.py
- test_to_numpyd.py
- test_to_pil.py
- test_to_pild.py
- test_to_tensor.py
- test_to_tensord.py
- test_torchio.py
- test_torchiod.py
- test_torchvision.py
- test_torchvisiond.py
- test_transform.py
- test_transpose.py
- test_transposed.py
- test_ultrasound_confidence_map_transform.py
- test_utils_pytorch_numpy_unification.py
- test_vote_ensemble.py
- test_vote_ensembled.py
- test_with_allow_missing_keys.py
- test_zoom.py
- test_zoomd.py
- __init__.py
- test_hovernet_loss.py
- test_ordering.py
- test_wsireader.py
- __init__.py
- test_ensure_tuple.py
- test_monai_env_vars.py
- test_monai_utils_misc.py
- test_str2bool.py
- test_str2list.py
- __init__.py
- test_convert_data_type.py
- test_get_equivalent_dtype.py
- test_safe_dtype_range.py
- __init__.py
- test_alias.py
- test_component_store.py
- test_deprecated.py
- test_enum_bound_interp.py
- test_evenly_divisible_all_gather_dist.py
- test_get_package_version.py
- test_handler_logfile.py
- test_handler_metric_logger.py
- test_list_to_dict.py
- test_look_up_option.py
- test_optional_import.py
- test_pad_mode.py
- test_profiling.py
- test_rankfilter_dist.py
- test_require_pkg.py
- test_safe_eval.py
- test_sample_slices.py
- test_set_determinism.py
- test_squeeze_unsqueeze.py
- test_state_cacher.py
- test_torchscript_utils.py
- test_version.py
- test_version_after.py
- __init__.py
- test_blend_images.py
- test_matshow3d.py
- __init__.py
- test_img2tensorboard.py
- test_occlusion_sensitivity.py
- test_plot_2d_or_3d_image.py
- test_vis_cam.py
- test_vis_gradcam.py
- __init__.py
- clang_format_utils.py
- croppers.py
- hvd_evenly_divisible_all_gather.py
- lazy_transforms_utils.py
- min_tests.py
- nonconfig_workflow.py
- padders.py
- runner.py
- test_call_dist.py
- test_query_memory.py
- test_timedcall_dist.py
- test_utils.py
- .clang-format
- .coderabbit.yaml
- .deepsource.toml
- .dockerignore
- .gitattributes
- .gitignore
- .pre-commit-config.yaml
- .readthedocs.yml
- CHANGELOG.md
- CITATION.cff
- CODE_OF_CONDUCT.md
- CONTRIBUTING.md
- Dockerfile
- Dockerfile.slim
- environment-dev.yml
- LICENSE
- MANIFEST.in
- pyproject.toml
- README.md
- runtests.sh
- SECURITY.md
- setup.py
- versioneer.py
// repository documentation
Was this content helpful?
(0 ratings)