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MiST

★ 32 Open GitHub ↗

A rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller.

// repository documentation

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# MiST

MiST is a rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller.
It provides tools to download, index, and query schemes, as well as to construct (cg)MLST-based phylogenies.

# DOCUMENTATION

The documentation is available on the [Wiki](https://github.com/BioinformaticsPlatformWIV-ISP/MiST/wiki).

# CONTACT
[Create an issue](https://github.com/BioinformaticsPlatformWIV-ISP/MiST/issues) to report bugs, propose new functions 
or ask for help.

# CITATION

Bogaerts, B., Roosens, N.H.C. & Vanneste, K. MiST: rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele calling from draft genomes. BMC Genomics (2025). https://doi.org/10.1186/s12864-025-12324-z

MiST

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