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Sleep stage detection using ECG

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- - cibuildwheel.yml
- dependabot.yml
- - classification.md
  - configuration.md
  - datasets.md
  - feature_extraction.md
  - heartbeat_detection.md
  - plot.md
- - extra.css
  - mkdocstrings.css
- - ecgrecord_plot.svg
  - gudb_pearson.svg
  - hypnogram.svg
  - ltdb_runtime_logscale.svg
  - mitdb_metrics.svg
  - plot_ecg.svg
  - wrn-gru-mesa-weighted.svg
  - wrn-gru-mesa.svg
- - mathjax.js
- classification.md
- configuration.md
- datasets.md
- examples.md
- feature_extraction.md
- heartbeat_detection.md
- index.md
- plot.md
- - benchmark_detectors.py
  - config.yml
  - plot_benchmark_results.py
  - README.md
  - requirements-benchmark.txt
  - utils.py
- - wrn_gru_mesa.py
  - wrn_gru_mesa_weighted.py
  - ws_gru_mesa.py
- README.md
- - __init__.py
  - _heartbeat_detection.c
  - _heartbeat_detection.pyi
  - classification.py
  - config.py
  - config.yml
  - feature_extraction.py
  - heartbeats.py
  - plot.py
  - py.typed
  - utils.py
- conftest.py
- test_capslpdb.py
- test_classification.py
- test_config.py
- test_feature_extraction.py
- test_heartbeat_detection.py
- test_heartbeats.py
- test_nsrr.py
- test_sleep_readers.py
.gitignore
.readthedocs.yaml
CHANGELOG.md
CONTRIBUTING.md
LICENSE
mkdocs.yml
pyproject.toml
README.md
setup.py
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## SleepECG

SleepECG provides tools for sleep stage classification when [EEG](https://en.wikipedia.org/wiki/Electroencephalography) signals are not available. Based only on [ECG](https://en.wikipedia.org/wiki/Electrocardiography), SleepECG provides functions for

- downloading and reading open polysomnography datasets,
- detecting heartbeats from ECG signals, and
- classifying sleep stages (which includes preprocessing, feature extraction, and classification).

### Documentation

Documentation for SleepECG is available on [Read the Docs](https://sleepecg.readthedocs.io/en/stable/index.html). Check out the [changelog](https://github.com/cbrnr/sleepecg/blob/main/CHANGELOG.md) to learn what we added, changed, or fixed.

### Installation

SleepECG is available on PyPI and can be installed with [pip](https://pip.pypa.io/en/stable/):

```
pip install sleepecg
```

SleepECG with all optional dependencies can be installed with the following command:

```
pip install "sleepecg[full]"
```

If you want the latest development version, use the following command:

```
pip install git+https://github.com/cbrnr/sleepecg
```

### Example

The following example detects heartbeats in a short ECG (a one-dimensional NumPy array):

```python
import numpy as np
from sleepecg import detect_heartbeats, get_toy_ecg

ecg, fs = get_toy_ecg()  # 5 min of ECG data at 360 Hz
beats = detect_heartbeats(ecg, fs)  # indices of detected heartbeats
```

### Contributing

The [contributing guide](https://github.com/cbrnr/sleepecg/blob/main/CONTRIBUTING.md) contains detailed instructions on how to contribute to SleepECG.

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