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SmartR

SmartR 최신버젼 다운로드

최종 버전 다운로드 (.zip)

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## If you use SmartR in your publication please cite it:
https://doi.org/10.1093/bioinformatics/btx137

###SmartR is a grails plugin seeking to improve the visual analytics of the [tranSMART platform](https://github.com/transmart/transmartApp) by using recent web technologies such as [d3](http://d3js.org/).

[![Heatmap Example](https://i.imgur.com/WGFV2kD.png)](https://youtu.be/Gg0AdYt77Cs)

#### Installation
##### tranSMART 16.2, eTRIKS v3 and younger builds
SmartR will be included by default. No modification necessary.

##### tranSMART 1.2.5 and 16.1
1. Add ```runtime ':smart-r:1.0-STABLE-SNAPSHOT'``` to **BuildConfig.groovy** in the **transmartApp** source code.
2. Compile a WAR file via ```grails war``` for deployment.

##### tranSMART 1.2.4 and older
1. Add ```runtime ':smart-r:1.0-STABLE-SNAPSHOT'``` to **BuildConfig.groovy** in the **transmartApp** source code.
2. Add the following code to **transmartApp/web-app/js/datasetExplorer/datasetExplorer.js** near [>>this location<< :](https://github.com/transmart/transmartApp/blob/release-1.2.4/web-app/js/datasetExplorer/datasetExplorer.js#L782) 
```loadPlugin('smartR', "/SmartR/loadScripts", function () {
    resultsTabPanel.insert(4, smartRPanel);
})```
3. Compile a WAR file via ```grails war``` for deployment.

#### Requirements
- SmartR requires the following R packages:
  - [jsonlite](https://cran.r-project.org/web/packages/jsonlite/index.html)
  - [gplots](https://cran.r-project.org/web/packages/gplots/index.html)
  - [reshape2](https://cran.r-project.org/web/packages/reshape2/index.html)
  - [WGCNA](https://cran.r-project.org/web/packages/WGCNA/index.html)
  - [limma](https://bioconductor.org/packages/release/bioc/html/limma.html)
  - [zoo](https://cran.r-project.org/web/packages/zoo/index.html)
  
#### Releases
- https://github.com/transmart/SmartR/releases

#### Wiki
- https://wiki.transmartfoundation.org/display/transmartwiki/SmartR

SmartR

SmartR 최신버젼 다운로드

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SmartR

SmartR 최신버젼 다운로드

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