revolver

KO | EN

gitlite — search

#hacktoberfest #typescript #golang #machine-learning #linux #macos #java #awesome #cli #vue #security #ios #mcp #openai

(★ 68)

Tumour stratification by maximum-likelihood repeated evolution from multi-region sequencing data

revolver 최신버젼 다운로드

최종 버전 다운로드 (.zip)

// repository documentation

Was this content helpful?

★ 0 (0 ratings)

[![R-CMD-check](https://github.com/caravagnalab/revolver/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/caravagnalab/revolver/actions/workflows/R-CMD-check.yaml)
[![pkgdown](https://github.com/caravagnalab/revolver/actions/workflows/pkgdown.yaml/badge.svg)](https://github.com/caravagnalab/revolver/actions/workflows/pkgdown.yaml)
[![Lifecycle: stable](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html#stable)
[![Citations](https://img.shields.io/badge/dynamic/json?url=https%3A%2F%2Fapi.semanticscholar.org%2Fgraph%2Fv1%2Fpaper%2FDOI%3A10.1038%2Fs41592-018-0108-x%3Ffields%3DcitationCount&query=%24.citationCount&label=citations&color=blue)](https://www.semanticscholar.org/paper/f58bb5b0e1b220575d44372c909f9ef195ffe067)
[![GitHub stars](https://img.shields.io/github/stars/caravagnalab/revolver?style=flat&color=yellow)](https://github.com/caravagnalab/revolver/stargazers)

# revolver <a href='https://caravagnalab.github.io/revolver'><img src='man/figures/logo.png' align="right" height="139" /></a>

The `revolver` package implements the statistical model described in
[Caravagna et al; PMID:
30171232](https://www.ncbi.nlm.nih.gov/pubmed/30171232) to determine
trajectories of repeated evolution from multi-region sequencing data of
human cancers. The package implements functions to process data from
large cohorts, and determine different types of phylogenetic trees from
the input data of each input patients. The package provides also several
functions to plot the data and determine clusters of patients that share
repeated evolutionary trajectories; this provides a method to stratify
cancer patients for the way their tumour evolve, reconciling tumour
heterogeneity both between and within patients.

#### Citation

If you use `revolver`, please cite:

-   G. Caravagna, Y. Giarratano, D. Ramazzoti, I. Tomlinson, T.A.
    Graham, G. Sanguinetti, A. Sottoriva. *Detecting repeated cancer
    evolution from multi-region tumor sequencing data.* Nature Methods
    15, 707–714 (2018).

[![](https://img.shields.io/badge/doi-10.1038/s41592--018--0108--x-red.svg)](https://doi.org/10.1038/s41592-018-0108-x)

#### Help and support

[![](https://img.shields.io/badge/GitHub%20Pages-https://caravagnalab.github.io/revolver/-yellow.svg)](https://caravagnalab.github.io/revolver)

------------------------------------------------------------------------

### Installation

You can install the released version of `revolver` from
[GitHub](https://github.com/) with:

``` r
# install.packages("devtools")
devtools::install_github("caravagnalab/revolver")
```

------------------------------------------------------------------------

#### Copyright and contacts

Cancer Data Science (CDS) Laboratory. University of Trieste, Italy.

[![](https://img.shields.io/badge/CDS%20Lab%20Github-caravagnalab-seagreen.svg)](https://github.com/caravagnalab)
[![](https://img.shields.io/badge/CDS%20Lab%20webpage-https://www.caravagnalab.org/-red.svg)](https://www.caravagnalab.org/)

revolver

revolver 최신버젼 다운로드

오늘의 추천 프로젝트

Was this content helpful?

Recent Feedback

revolver

revolver 최신버젼 다운로드

오늘의 추천 프로젝트

Was this content helpful?

Recent Feedback

Download README