diagonalsw:C/C++ implementation of the Smith-Waterman algorithm by using SIMD operations (e.g SSE4.1)
Jupiter-Bioinformatics-V4:Jupiter Bioinformatics is a browser-based tool for interactive pairwise sequence alignment and heatmap visualization. Built on the Smith-Waterman local alignment algorithm, it renders the full scoring matrix as a color-coded heatmap on an HTML5 canvas, no installation, no server, no dependencies. Open the file and start aligning.
Smith-Waterman:Parallel implementation of Smith–Waterman using OpenMP
