PyFMGUI

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PyFMGUI is an application for the analysis of force microscopy data capable of analyzing Nanoscope and JPK AFM files.

PyFMGUI 최신버젼 다운로드

최종 버전 다운로드 (.zip)

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# PyFMGUI

>[!Warning]
>## Currently the version in active development is located in the following fork: 
>[https://github.com/DyNaMo-INSERM/PyFMGUI_DyNaMo.git](https://github.com/DyNaMo-INSERM/PyFMlab_DyNaMo)
>
>Here you will find the latest release of the code being maintained by the team at the DyNaMo-INSERM lab.

## Introduction
PyFMGUI is an application for the analysis of force microscopy data capable of analyzing Nanoscope and JPK AFM files.

The following analysis routines are supported:
- Thermal tune calibration (JPK .tnd files)
- Elastic fit (Hertz Model fit)
- Viscoelastic fit
- Piezo characterization
- Viscous drag correction
- Microrheology (DMA) analysis

If you have any suggestions, comments or experience any issues. Please open an issue on this repository.

https://github.com/jlopezalo/PyFMGUI/issues

## Run software
A zip containing the frozen application can be found and downloaded here:

https://doi.org/10.5281/zenodo.8301684

To run, extract the contents of the .zip and run the main.exe file.

## To run from source
- Clone the repository
```
git clone https://github.com/jlopezalo/PyFMGUI.git
cd ./PyFMGUI
```
- Create an environment with python 3.9
```
conda create -n yourenvname python=3.9 
conda activate yourenvname
```

- Install the dependencies from requirements.txt
```
pip install -r requirements.txt
```
- run src/main.py
```
python src/main.py
```

## Generate executables
If you wish to do any changes to the code and freeze them. You can use PyInstaller and run the main.spec file (Windows).
```
python -m PyInstaller main.spec
```

## To Do
- Generate documentation with examples and tutorials
- Improve multiprocessing
- Improve tree control for files (allow to load multiple directories at once and assign folder as group)
- Allow to save analysis sessions and load them after
- Improve error handling and logging

PyFMGUI

PyFMGUI 최신버젼 다운로드

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