EigenFold
EigenFold: Generative Protein Structure Prediction with Diffusion Models
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Download Latest Version (.zip)- __init__.py
- sampling.py
- schedule.py
- sde.py
- __init__.py
- resi_score_model.py
- utils.py
- 1a6d.A.pdb.0.pdb
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- 5jyt.A.pdb.3.pdb
- 5jyt.A.pdb.4.pdb
- 5jzh.A.pdb.0.pdb
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- 5jzh.A.pdb.2.pdb
- 5jzh.A.pdb.3.pdb
- 5jzh.A.pdb.4.pdb
- 5keq.F.pdb.0.pdb
- 5keq.F.pdb.1.pdb
- 5keq.F.pdb.2.pdb
- 5keq.F.pdb.3.pdb
- 5keq.F.pdb.4.pdb
- 5l35.D.pdb.0.pdb
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- 5l35.D.pdb.2.pdb
- 5l35.D.pdb.3.pdb
- 5l35.D.pdb.4.pdb
- 5ly6.B.pdb.0.pdb
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- 5ly6.B.pdb.2.pdb
- 5ly6.B.pdb.3.pdb
- 5ly6.B.pdb.4.pdb
- 6z4u.A.pdb.0.pdb
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- 7ahl.E.pdb.0.pdb
- 7ahl.E.pdb.1.pdb
- 7ahl.E.pdb.2.pdb
- 7ahl.E.pdb.3.pdb
- 7ahl.E.pdb.4.pdb
- apo.csv.ep7.num5.step0.5.alpha1.0.beta3.0.elbo0.2.csv
- args.yaml
- cameo2022.csv.ep7.num5.step0.5.alpha1.0.beta3.0.elbo0.2.csv
- codnas.csv.ep7.num5.step0.5.alpha1.0.beta3.0.elbo0.2.csv
- epoch_7.pt
- apo.csv
- cameo2022.csv
- cameo2022_orig.csv
- codnas.csv
- codnas_orig.csv
- revision1_86_plus_5.csv
- 1a0r.B.pdb
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- 1a6e.A.pdb
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- 1aw1.B.pdb
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- 1bv2.A.pdb
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- 1cee.B.pdb
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- 1cg0.A.pdb
- 1cz2.A.pdb
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- 7q83.D.pdb
- 7q9e.C.pdb
- 7qau.A.pdb
- 7qpe.A.pdb
- 7qsw.B.pdb
- 7qsw.C.pdb
- 7qsx.A.pdb
- 7qys.L.pdb
- 7r08.E.pdb
- 7r0o.B.pdb
- 7r3w.D.pdb
- 7r49.B.pdb
- 7rlk.D.pdb
- 7rmy.A.pdb
- 7roa.A.pdb
- 7rpn.A.pdb
- 7rt7.D.pdb
- 7rup.A.pdb
- 7ruq.A.pdb
- 7s03.A.pdb
- 7s8k.B.pdb
- 7sao.A.pdb
- 7sbd.H.pdb
- 7sfn.B.pdb
- 7skh.B.pdb
- 7skj.A.pdb
- 7snc.A.pdb
- 7snj.A.pdb
- 7soo.A.pdb
- 7spn.A.pdb
- 7sz2.B.pdb
- 7t12.B.pdb
- 7t1j.B.pdb
- 7t5w.B.pdb
- 7te2.A.pdb
- 7tgi.B.pdb
- 7th2.C.pdb
- 7tif.A.pdb
- 7tol.A.pdb
- 7tvw.A.pdb
- 7u04.H.pdb
- 7u0e.H.pdb
- 7uav.A.pdb
- 7ug9.A.pdb
- 7upm.A.pdb
- 7upv.A.pdb
- 7uqv.D.pdb
- 7uwg.C.pdb
- 7ux0.A.pdb
- 7uxt.A.pdb
- 7v2s.B.pdb
- 7v5f.A.pdb
- 7v8t.A.pdb
- 7vbo.A.pdb
- 7vd7.B.pdb
- 7vf3.B.pdb
- 7vfc.A.pdb
- 7vfq.C.pdb
- 7vi8.B.pdb
- 7vil.A.pdb
- 7vma.A.pdb
- 7vmf.A.pdb
- 7vmh.C.pdb
- 7vp3.C.pdb
- 7vp6.D.pdb
- 7vpu.A.pdb
- 7vqk.A.pdb
- 7vr2.A.pdb
- 7vrf.A.pdb
- 7vt4.A.pdb
- 7vt5.A.pdb
- 7vyu.A.pdb
- 7w06.A.pdb
- 7w16.A.pdb
- 7w42.B.pdb
- 7w52.B.pdb
- 7w6x.A.pdb
- 7w7h.E.pdb
- 7w89.A.pdb
- 7w8u.A.pdb
- 7wa9.A.pdb
- 7wbn.A.pdb
- 7wf6.A.pdb
- 7wf8.B.pdb
- 7wf9.A.pdb
- 7wfx.A.pdb
- 7whf.G.pdb
- 7wj0.A.pdb
- 7wjt.B.pdb
- 7wq5.A.pdb
- 7wua.A.pdb
- 7x0g.A.pdb
- 7x0q.A.pdb
- 7x0r.B.pdb
- 7x15.A.pdb
- 7x1k.A.pdb
- 7x7w.A.pdb
- 7x8c.B.pdb
- 7xce.A.pdb
- 7xjt.B.pdb
- 7xtm.B.pdb
- 7y0i.A.pdb
- 7y39.B.pdb
- 7y3k.A.pdb
- 7y3w.A.pdb
- 7y4n.A.pdb
- 7y78.B.pdb
- 7y79.B.pdb
- 7y8u.E.pdb
- 7y9b.A.pdb
- 7ycv.A.pdb
- 7ymo.A.pdb
- 7yrt.C.pdb
- 7yta.B.pdb
- 7yvt.B.pdb
- 7yvz.A.pdb
- 7ywq.A.pdb
- 7z06.A.pdb
- 7zc8.A.pdb
- 7zgi.B.pdb
- 7zgm.A.pdb
- 7zk1.A.pdb
- 7zty.A.pdb
- 7zva.A.pdb
- 7zw9.A.pdb
- 8a28.A.pdb
- 8a4a.A.pdb
- 8ag9.A.pdb
- 8ahp.A.pdb
- 8ajp.A.pdb
- 8b26.A.pdb
- 8b55.A.pdb
- 8b5t.A.pdb
- 8b5v.A.pdb
- 8b73.A.pdb
- 8cwp.A.pdb
- 8cxl.A.pdb
- 8d03.A.pdb
- 8d08.D.pdb
- 8d7f.A.pdb
- 8day.A.pdb
- 8dgg.A.pdb
- 8di0.C.pdb
- 8di1.A.pdb
- 8dkr.B.pdb
- 8doa.A.pdb
- 8ds5.A.pdb
- 8dt0.A.pdb
- 8dt6.C.pdb
- 8dte.A.pdb
- 8dys.A.pdb
- 8e8t.B.pdb
- 8e8u.C.pdb
- 8gxf.B.pdb
- dataset.py
- inference.py
- logging.py
- parsing.py
- pdb.py
- protein_residues.py
- training.py
- download_pdb.sh
- eigenfold.png
- ensemble_analysis.ipynb
- inference.py
- LICENSE
- make_embeddings.py
- make_splits.py
- README.md
- single_structure_analysis.ipynb
- train.py
- unpack_pdb.py
// repository documentation
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