GANs-for-Medical-Image-Analysis

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GANs-for-Medical-Image-Analysis

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# GANs-for-Medical-Image-Analysis

A link collection for all papers which have been reviewed in the paper "GANs for Medical Image Analysis", for which code is available online.

## Category: Synthesis

| Paper                                                                                                                 | Authors                  | Code                                                                                                    |
|-----------------------------------------------------------------------------------------------------------------------|--------------------------|---------------------------------------------------------------------------------------------------------|
| Staingan: Stain style transfer for digital histological images                                                        | Shaban et al. (2018)     | https://github.com/xtarx/StainGAN                                                                       |
| Synthesizing filamentary structured images with gans                                                                  | Zhao et al. (2017)       | https://web.bii.a-star.edu.sg/archive/machine_learning/Projects/filaStructObjs/Synthesis/downloads.html |
| Towards virtual h&e staining of hyperspectral lung histology images using conditional generative adversarial networks | Bayramoglu et al. (2017) | http://www.ee.oulu.fi/~nyalcinb/papers/iccv2017/index.html                                              |
| Medical image synthesis with context-aware generative adversarial networks                                            | Dong et al. (2017)       | https://github.com/ginobilinie/medSynthesis                                                             |
| End-to-end adversarial retinal image synthesis                                                                        | Costa et al. (2017)      | https://github.com/costapt/adversarial_retinal_synthesis                                                |
| Synthetic medical images from dual generative adversarial networks                                                    | Guibas et al. (2017)     | https://github.com/tejpalv/synthetic-medical-images                                                     |
| Freehand ultrasound image simulation with spatially-conditioned generative adversarial networks                       | Hu et al. (2017)         | https://niftynet.readthedocs.io/en/dev/_modules/niftynet/network/simulator_gan.html                     |

## Category: Segmentation

| Paper                                                                                             | Authors                 | Code                                             |
|---------------------------------------------------------------------------------------------------|-------------------------|--------------------------------------------------|
| Unsupervised domain adaptation in brain lesion segmentation with adversarial networks             | Kamnitsas et al. (2017) | https://github.com/deepmedic/deepmedic           |
| Retinal vessel segmentation in fundoscopic images with generative adversarial networks            | Son et al. (2017)       | https://bitbucket.org/woalsdnd/v-gan/src/master/ |
| Microscopy cell segmentation via adversarial neural networks                                      | Arbelle et al. (2018)   | https://github.com/arbellea/DeepCellSeg          |
| Factorised spatial representation learning: Application in semisupervised myocardial segmentation | Chartsias et al. (2018) | https://github.com/agis85/spatial_factorisation  |

## Category: Denoising

| Abbreviation | Paper                                                          | Authors       | Link                              |
|--------------|----------------------------------------------------------------|---------------|-----------------------------------|
|              |                                                                |               |                                   |

## Category: Reconstruction

| Paper                                                                                     | Authors            | Code                                |
|-------------------------------------------------------------------------------------------|--------------------|-------------------------------------|
| Compressed sensing mri reconstruction with cyclic loss in generative adversarial networks | Quan et al. (2017) | https://github.com/tmquan/RefineGAN |                                                              |               |                                   |

## Category: Classification & Detection

| Paper                                             | Authors                   | Code                                   |
|---------------------------------------------------|---------------------------|----------------------------------------|
| Visual feature attribution using wasserstein gans | Baumgartner et al. (2018) | https://github.com/baumgach/vagan-code |
| Unsupervised anomaly detection with generative adversarial networks to guide marker discovery | Schlegl et al. (2017) | https://github.com/tSchlegl/f-AnoGAN |

## Category: Registration

| Paper                                             | Authors                   | Code                                   |
|---------------------------------------------------|---------------------------|----------------------------------------|
|                                                   |                           |                                        |

GANs-for-Medical-Image-Analysis

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