CellularAutomataEpidemicModels

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CellularAutomataEpidemicModels

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Stochastic Cellular Automata epidemic models in Python with 2D simulations

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# Cellular Automata Epidemic Models #

These scripts are a "quick-to-test" precursor to the EpidemicSimulator project.
The most interesting source is inside the "WorkingModels" directory which contains models that work.

## Epidemic models:

* Stochastic Cellular Automata: SEIRS (Susceptible Exposed Infected Recovered), SIS, SIR, SEIS, SIRS
* Numerical ODE based: SIR with no birthds/deaths and SIR with birthds/deaths
* Cellular Automata "Forest Fire": SIR
* Coupled Lattice 2D: with Moore and von Neumann neighborhoods

## Features:

* 2D image visualizations with PyGame.
* Graph visualizations and various random distributions with Numpy and PyLab.

## Required compiler/plugins:

* Python 2.7 32bit version for win32.(package Python 3.4 Anaconda 2.3.0  Windows 32bit version from https://www.continuum.io/downloads). It includes Numpy (for numerics/random) and Pylab (for plots).
* IDE: PyCharm 4.5 Professional
* 2D graphics: PyGame version 19.2a0 Win32 for Python 3.4. (http://pygame.org/ftp/pygame-1.9.2a0.win32-py2.7.msi )

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